Indian Journal of Dermatology
ORIGINAL ARTICLE
Year
: 2018  |  Volume : 63  |  Issue : 6  |  Page : 449--454

Genomic reduction at TTC repeats in the bacterial genome of treated cases of Hansen's disease: A possible survival mechanism of Mycobacterium leprae


Abu Hena Hasanoor Reja1, Abhishek De2, Pradip Kumar Patra3, Supratik Biswas1, Umesh Duttagupta4, Amrita Sil5, Nibir Biswas6, Surajita Bannerjee7, Aarti Sarda1, Basudev Bhattacharya1 
1 Department of Biochemistry, IPGMER, Kolkata, West Bengal, India
2 Department of Dermatology, Calcutta National Medical College, Kolkata, West Bengal, India
3 Department of Biochemistry, PTJNM Medical College, Raipur, Chhattisgarh, India
4 National Jalma Institute of Leprosy and Other Mycobacterial Diseases, Agra, Uttar Pradesh, India
5 Department of Pharmacology, IPGMER, Kolkata, West Bengal, India
6 Department of Dermatology, School of Tropical Medical College, Kolkata, West Bengal, India
7 Department of Dermatology, KPC Medical College, Kolkata, West Bengal, India

Correspondence Address:
Dr. Abhishek De
Flat Number 3A, Arcadia1, Dream Park, Sonarpur Station Road, Kolkata - 700 103, West Bengal
India

Introduction: Mycobacterium leprae has a small genome and a tendency of persisting as a very low-grade infection. The authors have shown earlier, that the changes in TTC repeats, in M. leprae genome may contribute to the restriction of the pathogenicity of the bacterium and its survival strategy in case of pure neural Hansen's disease. We suspect, that a similar genomic reduction if happens in treated cases of Hansen's disease, can be a determining factor for developing persisters and relapse. Aim: The present study aimed to find out if there was any evidence of genomic reduction in treated cases of Hansen's disease that showed microbiological nonresponse. Methods: Skin biopsies were taken from treated cases of Hansen's disease at tertiary centers in Kolkata and at Raipur who had bacterial index (BI) unchanged or increased compared to their pretreatment BI. Analysis for the mutation in rpoB gene and folP1 gene were done to rule out rifampicin and dapsone resistance, respectively. The entire TTC repeat region of the bacteria was amplified by polymerase chain reaction and was subjected to sequencing. The obtained sequences were then analyzed by CLUSTALW. Results: A total of 127 patients were included in the study of which in 52 the BI remained same and 75 had an increase in BI, even after 6 months of completion of multidrug therapy. Among the samples, 2 had positive rpoB gene mutation. No mutation was found in the folP1 gene. The TTC repeat of both the rpoB-resistant samples was found to have 17 copies, which matched their pretreatment copy number. In other 125 cases, 60 cases showed no change from their pretreatment TTC number. Of those 65 samples that showed evidence of genomic reduction, 11 samples showed one copy, 41 showed 2 copies, and 13 showed 3 copies deletion. We also observed a significant regional variation. Conclusion: We concluded that there was evidence of genomic reduction, which might lead to microbiological nonresponse in treated cases of Hansen's disease. This indicated a possibility of future persistence and relapse.


How to cite this article:
Reja AH, De A, Patra PK, Biswas S, Duttagupta U, Sil A, Biswas N, Bannerjee S, Sarda A, Bhattacharya B. Genomic reduction at TTC repeats in the bacterial genome of treated cases of Hansen's disease: A possible survival mechanism of Mycobacterium leprae.Indian J Dermatol 2018;63:449-454


How to cite this URL:
Reja AH, De A, Patra PK, Biswas S, Duttagupta U, Sil A, Biswas N, Bannerjee S, Sarda A, Bhattacharya B. Genomic reduction at TTC repeats in the bacterial genome of treated cases of Hansen's disease: A possible survival mechanism of Mycobacterium leprae. Indian J Dermatol [serial online] 2018 [cited 2018 Dec 14 ];63:449-454
Available from: http://www.e-ijd.org/article.asp?issn=0019-5154;year=2018;volume=63;issue=6;spage=449;epage=454;aulast=Reja;type=0